Talanta丨Multi-point scanning confocal Raman spectroscopy for accurate identification of microorganisms at the single-cell level

2022-12-07

In November 2022, the research team of Bei Li from Changchun Institute of Optics and Mechanics of the Chinese Academy of Sciences and the team of Professor  Zhenming Lu from Jiangnan University published a paper entitled "Multi-point scanning confocal Raman spectroscopy for accurate identification of microorganisms at the single-cell level" in the journal "Talanta" using the core product of HOOKE P300. In this study, a multipoint scanning confocal Raman spectroscopy technology was proposed to establish a more reliable database of microbial single cell Raman spectroscopy, and more accurately classify and identify microorganisms.

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Abstract


Raman spectroscopy has been widely used for microbial analysis due to its exceptional qualities as a rapid, simple, non-invasive, reproducible, and real-time monitoring tool. The Raman spectrum of a cell is a superposition of the spectral information of all biochemical components in the laser focus. In the case where the microbial size is larger than the laser spot size, the Raman spectrum measured from a single-point within a cell cannot capture all biochemical information due to the spatial heterogeneity of microorganisms. In this work, we have proposed a method for the accurate identification of microorganisms using multi-point scanning confocal Raman spectroscopy. Through an image recognition algorithm and the control of a high-precision motorized stage, Raman spectra can be integrated at one time to measure the multi-point biochemical information of microorganisms. This solves the problem that the measured single microbial cells are of different sizes, and the laser spot of the confocal Raman system is not easy to change. Here, the single-cell Raman spectra of three Escherichia coli and seven Lactobacillus species were measured separately. The commonly used supervised classification method, support vector machine (SVM), was applied to compare the data based on the single-point spectra and multi-point scanning spectra. Multi-point spectra showed superior performance in terms of their accuracy and recall rates compared with single-point spectra. The results show that multi-point scanning confocal Raman spectra can be used for more accurate species classification at different taxonomic levels, which is of great importance in species identification.


The paper links:

https://doi.org/10.1016/j.talanta.2022.124112



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